Issue |
Genet. Sel. Evol.
Volume 33, Number 3, May-June 2001
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Page(s) | 209 - 229 | |
DOI | https://doi.org/10.1051/gse:2001117 |
Genet. Sel. Evol. 33 (2001) 209-229
The distribution of the effects of genes affecting quantitative traits in livestock
Ben Hayesa and Mike E. Goddarda, ba Institute of Land and Food Resources, University of Melbourne, Parkville, Victoria, 3052, Australia
b Department of Natural Resources and Environment, Victorian Institute of Animal Science, Attwood, Victoria, 3049, Australia
(Received 24 January 2000; accepted 2 January 2001)
Abstract
Meta-analysis of information from quantitative trait loci (QTL)
mapping experiments was used to derive distributions of the effects of
genes affecting quantitative traits. The two limitations of such
information, that QTL effects as reported include experimental error,
and that mapping experiments can only detect QTL above a certain size,
were accounted for. Data from pig and dairy mapping experiments were
used. Gamma distributions of QTL effects were fitted with maximum
likelihood. The derived distributions were moderately leptokurtic,
consistent with many genes of small effect and few of large
effect. Seventeen percent and 35% of the leading QTL explained 90% of the
genetic variance for the dairy and pig distributions respectively. The
number of segregating genes affecting a quantitative trait in dairy
populations was predicted assuming genes affecting a quantitative
trait were neutral with respect to fitness. Between 50 and 100 genes
were predicted, depending on the effective population size assumed. As
data for the analysis included no QTL of small effect, the ability to
estimate the number of QTL of small effect must inevitably be weak. It
may be that there are more QTL of small effect than predicted by our
gamma distributions. Nevertheless, the distributions have important
implications for QTL mapping experiments and Marker Assisted Selection
(MAS). Powerful mapping experiments, able to detect QTL of
, will be required to detect enough QTL to explain 90%
the genetic variance for a quantitative trait.
Key words: distribution of gene effects / quantitative trait loci / genetic variance / marker assisted selection
Correspondence and reprints: Ben Hayes
e-mail: Ben.Hayes@nre.vic.gov.au
© INRA, EDP Sciences 2001