EDP Sciences logo
Search
Menu
All issues Volume 35 / No 5 (September-October 2003) Genet. Sel. Evol., 35 5 (2003) 533-557 References
Free Access
Issue
Genet. Sel. Evol.
Volume 35, Number 5, September-October 2003
Page(s) 533 - 557
DOI https://doi.org/10.1051/gse:2003038

References

  1. Barker J.S.F., Bradley D.G., Fries R., Hill W.G., Nei M., Wayne R.K., An integrated global protocol to establish the genetic relationships among the breeds of each domestic animal species, Report of a Working Group, Animal Production and Health Division, FAO, 1993.
  2. Bowcock A.M., Ruiz-Linares A., Tomfohrde J., Minch E., Kidd J.R., Cavalli-Sforza L.L., High-resolution of human evolutionary trees with polymorphic microsatellites, Nature 368 (1994) 455-457.
  3. Cavalli-Sforza L.L., Edwards K.J., Phylogenetic analysis: models and estimation procedures, Am. J. Hum. Genet. 19 (1967) 233-257.
  4. Cheng H.H., Crittenden L.B., Microsatellite markers for genetic mapping in the chicken, Poult. Sci. 73 (1994) 539-546.
  5. Crawford R.D., Domestic fowl, in: Mason I.L. (Ed.), Evolution of domesticated animals, Longman, London, 1984, pp. 298-311.
  6. Crawford R.D., Origin and history of poultry species, in: Crawford R.D. (Ed.), Poultry Breeding and Genetics, Elsevier, New York, 1990, pp. 317-329.
  7. Crawford R.D., Christman C.J., Heritage Hatchery Networks in Poultry Conservation, in: Alderson L., Bodo I. (Eds.), Genetic Conservation of Domestic Livestock, CAB International, Oxon, UK, 1992, pp. 121-122.
  8. Crooijmans R.P.M.A., Van Kampen A.J.A., Van der Poel J.J., Groenen M.A.M., Highly polymorphic microsatellite markers in poultry, Anim. Genet. 24 (1993) 441-443.
  9. Crooijmans R.P.M.A., Van Oers P.A.M., Strijk J.A., Van der Poel J.J., Groenen M.A.M., Preliminary linkage map of the chicken (Gallus domesticus) genome based on microsatellite markers: 77 new markers mapped, Poult. Sci. 75 (1996) 746-754.
  10. Crooijmans R.P.M.A., Groen A.F., Van Kampen A.J.A., Van der Beek S., Van der Poel J.J., Groenen M.A.M., Microsatellite polymorphism in commercial broiler and layer lines estimated using pooled blood samples, Poult. Sci. 75 (1996) 904-909.
  11. de Gortari M.J., Freking B.A., Kappes S.M., Leymaster K.A., Crawford A.M., Stone R.T., Beattie C.W., Extensive genomic conservation of cattle microsatellite heterozygosity in sheep, Anim. Genet. 28 (1997) 274-290.
  12. Dunnington E.A., Gal O., Plotsky Y., Haberfeld A., Kirk T., Goldberg A., Lavi U., Cahaner A., Siegel P.B., Hillel J., DNA fingerprints of chickens selected for high and low body weight for 31 generations, Anim. Genet. 21(1990) 221-231.
  13. Dunnington E.A., Stallard L.C., Hillel J., Siegel P.B., Genetic diversity among commercial chicken populations estimated from DNA fingerprints, Poult. Sci. 73 (1994) 1218-1225.
  14. Fumihito A., Miyake T., Sumi S., Takada M., Ohno S., Kondo N., One subspecies of the red jungle fowl (Gallus gallus gallus) suffices as the matriarchic ancestor of all domestic breeds, Proc. Natl. Acad. Sci. USA. 91 (1994) 12505-12509.
  15. Fumihito A., Miyake T., Takada M., Shingu R., Endo T., Gojobori T., Kondo N., Ohno S., Monophyletic origin and unique dispersal patterns of domestic fowls, Proc. Natl. Acad. Sci. USA 93 (1996) 6792-6795.
  16. Garcia de Leon F.J., Dallas J.F., Chatain B., Canonne M., Versini J.J., Bonhomme F., Development and use of microsatellite markers in sea bass, Dicentrarchus labrax (Linnaeus, 1758) (Perciformes: Serrandidae), Mol. Mar. Biol. Biotechnol. 4 (1995) 62-68.
  17. Gill J.J.B., Kelly E.P., Genetic variation in rare breeds and the measurement of homozygosity, in: Alderson L., Bodo I. (Eds.), Genetic Conservation of Domestic Livestock, CAB International, Oxon, UK, 1990, pp. 175-185.
  18. Goldstein D.B., Linares A.R., Cavalli-Sforza L.L., Feldman M.W., An evaluation of genetic distances for use with microsatellite loci, Genetics 139 (1995) 463-471.
  19. Goldstein D.B., Linares A.R., Cavalli-Sforza L.L., Feldman M.W., Genetic absolute dating based on microsatellites and the origin of modern humans, Proc. Natl. Acad. Sci. USA 92 (1995) 6723-6727.
  20. Groen A.F., Crooijmans R.P.M.A., Van Kampen A.J.A., Van der Beek S., Van der Poel J.J., Groenen M.A.M., Microsatellite polymorphism in commercial broiler and layer lines, in: Proceedings of the 5th World Congress on Genetics Applied to Livestock Production, Guelph, 7-12 August, 1994, Vol. 21, University of Guelph, Ontario, pp. 94-97.
  21. Groenen M.A., Ruyter D., Verstege E.J., de Vries M., Van der Poel J.J., Development and mapping of ten porcine microsatellite markers, Anim. Genet. 26 (1995) 115-118.
  22. Groenen M.A.M., Cheng H.H., Bumstead N., Benkel B., Briles E., Burt D.W., Burke T., Dodgson J., Hillel J., Lamont S., Ponce de Leon F.A., Smith G., Soller M., Takahashi H., Vignal A., Consensus linkage map of the chicken genome, Genome Res. 10 (2000) 137-147.
  23. Hartmann W., von dem Hagen D., Selektion von Leghornlinien auf Resistenz gegen Infektion durch Leukoseviren, Monatshefte Veterinärmedizin 39 (1984) 86-89.
  24. Hillel J., Plotzky Y., Gal O., Haberfeld A., Lavi U., Dunnington E.A., Siegel P.B., Jeffreys A.J., Cahaner A., DNA fingerprint in chickens, in: Proceedings of the 31st British poultry breeders roundtable, 20-22 September 1989, Reading.
  25. Hillel J., Avner R., Baxter-Jones C., Dunnington E.A., Cahaner A., Siegel P.B., DNA fingerprints from blood mixes in chickens and turkeys, Anim. Biotechnol. 2 (1990) 201-204.
  26. Hillel J., Korol A., Kirzner V., Freidlin P., Weigend S., Barre-Dirie A., Groenen M.A.M., Crooijmans R.P.M.A., Tixier-Boichard M., Vignal A., Wimmers K., Burke T., Thomson P.A., Maki-Tanila A., Elo K., Zhivotovsky L.A., Feldman M.W., Biodiversity of Chickens based on DNA pools: first results of the EC funded project AVIANDIV, in: Proceedings of the Poultry Genetic Symposium, 6-8 October 1999, Mariensee, Germany, pp. 22-29.
  27. Hunton P., Industrial breeding and selection, in: Crawford R.D. (Ed.), Poultry Breeding and Genetics, Elsevier, New York, 1990, pp. 1-42.
  28. JMP® , Statistical discovery software (version 4.0). SAS® Institute Inc. NC, USA.
  29. Jorde L.B., Watkins W.S., Bamshad M.J., Dixon M.E., Ricker C.E., Seielstad M.T., Batzer M.A., The distribution of human genetic diversity: A comparison of mitochondrial, autosomal, and Y-chromosome data, Am. J. Hum. Genet. 66 (2000) 979-988.
  30. Kavaca M., Karaca F.G., Patel C., Emara M.G., Preliminary analysis of microsatellite loci in commercial broiler chickens, in: Plant and Animal Genome VII Conference, 17-21 January, San Diego, 1999, CA, USA.
  31. Khatib H., Darvasi A., Plotski Y., Soller M., Determining relative microsatellite allele frequencies in pooled DNA samples, PCR Methods and Applications 4 (1994) 13-18.
  32. McKay J.K., Bishop J.G., Lin J., Richards J.H., Sala A., Mitchell-Olds T., Local adaptation across a climatic gradient despite small effective population size in the rare sapphire rockcress, Proc. R. Soc. Lond. B Biol. Sci. 268 (2001) 1715-1721.
  33. Moiseyeva I.G., Yuguo Z., Nikiforov A.A., Zakharov I.A., Comparative analysis of morphological traits in mediterranean and chinese chicken breeds: the problem of the origin of the domestic chicken, Russian J. Genet. 32 (1996) 1553-1561.
  34. Nei M., Genetic distance between populations, Am. Nat. 106 (1972) 283-292.
  35. Obata T., Takeda H., Oishi T., Japanese native livestock breeds, Anim. Genet. Resour. Inf. (UNEP-FAO) 13 (1994) 13-24.
  36. Ponsuksili S., Wimmers K., Schmoll F., Horst P., Schellander K., Comparison of multilocus DNA fingerprints and microsatellites in an estimate of genetic distance in chicken, J. Hered. 90 (1999) 656-659.
  37. Preisinger R., Zuchtstrategien für eine nachhaltige Legehennenzucht, Lohmann Inf. 2 (2000) 3-6.
  38. Reynolds J., Weir B.S., Cockerham C.C., Estimation of the co-ancestry coefficient basis for a short-term genetic-distance, Genetics 105 (1983) 767-779.
  39. Rogers A.R., Jorde L.B., Ascertainment bias in estimates of average heterozygosity, Am. J. Hum. Genet. 58 (1996) 1033-1041.
  40. Romanov M.N., Weigend S., Analysis of genetic relationships between various populations of domestic and jungle fowl using microsatellite markers, Poult. Sci. 80 (2001) 1057-1063.
  41. Rosenberg N.A., Burke T., Feldman M.W., Freidlin P.J., Groenen A.M., Hillel J., Mäki-Tanila A., Tixier-Boichard M., Vignal A., Wimmers K., Weigend S., Empirical evaluation of genetic clustering methods using multilocus genotypes from twenty chicken breeds, Genetics 159 (2001) 699-713.
  42. Rosenberg N.A., Pritchard J.K., Cann H., Weber J., Kidd K.K., Zhivotovsky L.A., Feldman M.W., Genetic structure of human populations, Science 298 (2002) 2381-2385.
  43. Teale A.J., Tan S.G., Tan J.H., Applications of molecular genetic and reproductive technologies in the conservation of domestic animal diversity, in: Proceedings of the 5th World Congress on Genetics Applied to Livestock Production, Guelph, 7-12 August 1994, Vol. 21, University of Guelph, Ontario, pp. 493-500.
  44. Tixier-Boichard M., Coquerelle G., Vilela-Lamego C., Weigend S., Barre-Dirrie A., Groenen M., Crooijmans R., Vignal A., Hillel J., Freidlin P., Wimmers K., Ponsuksili S., Burke T., Thomson P., Elo K., Maki-Tanila A., Baldane G., Baumgartner J., Benkova J., Bondarenko Y., Podstreshny A., Campo J., Cywa-Benko K., Jego Y., Knizetova H., Moiseeva I., Protais M., Pidone G., Rault P., Trefil P., van Sambeek F., Virag G., Hidas A., Contribution of data on history, management and phenotype to the description of the diversity between chicken populations sampled within the AVIANDIV project, in: Proceedings of the Poultry Genetic Symposium, 6-8 October 1999, Mariensee, Germany, pp. 15-21.
  45. Vanhala T., Tuiskula-Haavisto M., Elo K., Vilkki J., Maki-Tanila A.S.O., Evaluation of genetic variability and genetic distances between eight chicken lines using microsatellite markers, Poult. Sci. 77 (1998) 783-790.
  46. Weber J.L., Wong C., Mutation of human short tandem repeats, Hum. Mol. Genet. 2 (1993) 1123-1128.
  47. Weigend S., Assessment of Biodiversity in poultry with DNA markers, in: Proceedings of the Poultry Genetic Symposium, 6-8 October 1999, Mariensee, Germany, pp. 7-14.
  48. Zhou H., Lamont S.J., Microsatellite markers to estimate genetic differences among pedigree-defined inbred chicken lines of commercial and exotic origin, in: Proceedings "From Jay Lush to Genomics'': Visions for Animal Breeding and Genetics, 1999, Iowa, USA, p. 175 (abstract).
Abstract

Copyright INRA, EDP Sciences