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All issues Volume 36 / No 2 (March-April 2004) Genet. Sel. Evol., 36 2 (2004) 163-190 References
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Issue
Genet. Sel. Evol.
Volume 36, Number 2, March-April 2004
Page(s) 163 - 190
DOI https://doi.org/10.1051/gse:2003057
References of  Genet. Sel. Evol. 36 (2004) 163-190
  1. Abdel-Azim G., Freeman A.E., Superiority of QTL-assisted selection in dairy cattle breeding schemes, J. Dairy Sci. 85 (2002) 1869-1880 [PubMed].
  2. Andersson L., Genetic dissection of phenotypic diversity in farm animals, Nat. Rev. Genet. 2 (2001) 130-138 [CrossRef] [PubMed].
  3. Arranz J.J., Coppieters W., Berzi P., Cambisano N., Grisart B., Karim L., Marcq F., Moreau L., Mezer C., Riquet J., Simon P., Vanmanshoven P., Wagenaar D., Georges M., A QTL affecting milk yield and composition maps to bovine chromosome 20: a confirmation, Anim. Genet. 29 (1998) 107-115 [CrossRef] [PubMed].
  4. Ashwell M.S., Van Tassell C.P., Sonstegard T.S., The cooperative dairy DNA repository: a new resource for quantitative trait loci detection and verification, Proceedings of the 8th Plant and Animal Genome Conference, San Diego, CA, 2000.
  5. Ashwell M.S., Van Tassell C.P., Sonstegard T.S., A genome scan to identify quantitative trait loci affecting economically important traits in a US Holstein population, J. Dairy Sci. 84 (2001) 2535-2542 [PubMed].
  6. Ashwell M.S., Schnabel R.D., Sonstegard T.S., Van Tassell C.P., Fine-mapping of QTL affecting protein percent and fat percent on BTA6 in a popular US Holstein family, in: Proceedings of the 7th World Congress on Genetics Applied to Livestock Production, Montpellier, France, 19-23 August 2002, ISBN 2-7380-1052-0, Paper 09-29.
  7. Ashwell M.S., Rexroad C.E. Jr., Miller R.H., VanRaden P.M., Da Y., Detection of loci affecting milk production and health traits in an elite US Holstein population using microsatellite markers, Anim. Genet. 28 (1997) 216-222 [CrossRef].
  8. Bennewitz J., Reinsch N., Grohs C., Leveziel H., Malafosse A., Thomsen H., Xu N., Looft C., Kuhn C., Brockmann G.A., Schwerin M., Weimann C., Hiendleder S., Erhardt G., Medjugorac I., Russ I., Forster M., Brenig B., Reinhardt F., Reents R., Averdunk G., Blumel J., Boichard D., Kalm E., Combined analysis of data from two granddaughter designs: A simple strategy for QTL confirmation and increasing experimental power in dairy cattle, Genet. Sel. Evol. 35 (2003) 319-338 [EDP Sciences] [CrossRef] [PubMed].
  9. Blott S., Kim J., Moisio S., Schmidt-Küntzel A., Cornet A., Berzi P., Cambisano N., Ford C., Grisart B., Johnson D., Karim L., Simon P., Snell R., Spelman R., Wong J., Vilkki J., Georges M., Farnir F., Coppieters W., Molecular dissection of a quantitative trait locus: A phenylalanine-to-tyrosine substitution in the transmembrane domain of the bovine growth hormone receptor is associated with a major effect on milk yield and composition, Genetics 163 (2003) 253-266 [PubMed].
  10. Boichard D., Grohs C., Bourgeois F., Cerqueira F., Faugeras R., Neau A., Rupp R., Amigues Y., Boscher M.Y., Leveziel H., Detection of genes influencing economic traits in three French dairy cattle breeds, Genet. Sel. Evol. 35 (2003) 77-101 [EDP Sciences] [CrossRef] [PubMed].
  11. Bovenhuis H., Schrooten C., Quantitative trait loci for milk production traits in dairy cattle, in: Proceedings of the 7th World Congress on Genetics Applied to Livestock Production, Montpellier, France, 19-23 August 2002, ISBN 2-7380-1052-0, Paper 09-07.
  12. Bovenhuis H., Weller J.I., Mapping and analysis of dairy cattle quantitative trait loci by maximum likelihood methodology using milk protein genes as genetic markers, Genetics 137 (1994) 267-280 [PubMed].
  13. Chamberlain A., McParlan H., Balasingham T., Carrick M., Bowman P., Robinson N., Goddard M., Mapping QTL affecting milk composition traits in dairy cattle using a complex pedigree, Proceedings of the 7th World Congress on Genetics Applied to Livestock Production, Montpellier, France, 19-23 August 2002, ISBN 2-7380-1052-0, Paper 09-08.
  14. Cohen M., Serrousi E., Ron M., Reichenstein M., Plis-Finarov A., Shani M., Weller J.I., Population-wide linkage disequilibrium between a SNP and a QTL affecting milk protein production on BTA6 in dairy cattle, in: Proceedings of the 7th World Congress on Genetics Applied to Livestock Production, Montpellier, France, 19-23 August 2002, ISBN 2-7380-1052-0, Paper 09-12.
  15. Coppieters W., Riquet J., Arranz J.J., Berzi P., Cambisano N., Grisart B., Karim L., Marcq F., Moreau L., Nezer C., Simon P., Vanmanshoven P., Wagenaar D., Georges M., A QTL with major effect on milk yield and composition maps to bovine chromosome 14, Mamm. Genome 9 (1998) 540-544 [CrossRef] [PubMed].
  16. Corva P.M., Medrano J.F., Quantitative trait loci (QTLs) mapping for growth in the mouse: A Review, Genet. Sel. Evol. 33 (2001) 105-132 [EDP Sciences] [CrossRef] [PubMed].
  17. Egger M., Smith G.D., Meta-analysis bias in location and selection of studies, Brit. Med. J. 316 (1998) 61-66.
  18. Elo K.T., Vilkki J., de Koning D.J., Velmala R.J., Maki-Tanila A.V., A quantitative trait locus for live weight maps to bovine chromosome 23, Mamm. Genome 10 (1999) 831-835 [CrossRef] [PubMed].
  19. Elwood J.M., Critical appraisal of epidemiological studies and clinical trials, 2nd edn., Oxford University Press, Oxford, 1998.
  20. Farnir F., Grisart B., Coppieters W., Riquet J., Berzi P., Cambisano N., Karim L., Mni M., Moisio S., Simon P., Wagenaar D., Vilkki J., Georges M., Simultaneous mining of linkage and linkage disequilibrium to fine map quantitative trait loci in outbred half-sib pedigrees. Revisiting the location of a quantitative trait locus with major effect on milk production on bovine chromosome 14, Genetics 161 (2002) 275-287 [PubMed].
  21. Farnir F., Coppieters W., Arranz J.J., Berzi P., Cambisano N., Grisart B., Karim L., Marcq F., Moreau L., Mni M., Nezer C., Simon P., Vanmanshoven P., Wagenaar D., Georges M., Extensive genome-wide linkage disequilibrium in cattle, Genome Res. 10 (2000) 220-227 [CrossRef] [PubMed].
  22. Freyer G., Sorensen P., Kuhn C., Weikard R., Hoeschele I., Search for pleiotropic QTL on chromosome BTA6 affecting yield traits of milk production, J. Dairy Sci. 86 (2003) 999-1008 [PubMed].
  23. Freyer G., Kuhn C., Weikard R., Zhang Q., Mayer M., Hoeschele I., Multiple QTL on chromosome six in dairy cattle affecting yield and content traits, J. Anim. Breed. Genet. 119 (2002) 69-82 [CrossRef].
  24. Georges M., Nielsen D., Mackinnon M., Mishra A., Okimoto R., Pasquino A.T., Sargeant L.S., Sorensen A., Steele M.R., Zhao X., Womack J.E., Hoeschele I., Mapping quantitative trait loci controlling milk production in dairy cattle by exploiting progeny testing, Genetics 139 (1995) 907-920 [PubMed].
  25. Glass G.V., Primary, secondary and meta-analysis of research, Educ. Res. 5 (1976) 3-8.
  26. Goffinet B., Gerber S., Quantitative trait loci: a meta-analysis, Genetics 155 (2000) 463-473 [PubMed].
  27. Grisart B., Coppieters W., Farnir F., Karim L., Ford C., Berzi P., Cambisano N., Mni M., Reid S., Simon P., Spelman R., Georges M., Snell R., Positional candidate cloning of a QTL in dairy cattle: Identification of a missense mutation in the bovine DGAT1 gene with major effect on milk yield and composition, Genome Res. 12 (2002) 222-231 [CrossRef] [PubMed].
  28. Grupe S., Schwerin M., Mapping of quantitative trait loci on chromosome 23 in German Holstein cattle families, Arch. Tierzucht 41 (1998) 225-235.
  29. Hayes B., Goddard M.E., The distribution of the effects of genes affecting quantitative traits in livestock, Genet. Sel. Evol. 33 (2001) 209-229 [EDP Sciences] [CrossRef] [PubMed].
  30. Hedges L.V., Olkin I., Statistical methods for meta-analysis, Academic Press Inc., 1985.
  31. Heyen D.W., Weller J.I., Ron M., Band M., Beever J.E., Feldmesser E., Da Y., Wiggans G.R., VanRaden P.M., Lewin H.A., A genome scan for QTL influencing milk production and health traits in dairy cattle, Physiol. Genom. 1 (1999) 165-175.
  32. Ikonen T., Bovenhuis H., Ojala M., Ruottinen O., Georges M., Associations between casein haplotypes and first lactation milk production traits in Finnish Ayrshire cows, J. Dairy Sci. 84 (2001) 507-514 [PubMed].
  33. Interbull, Genetic evaluations, 2002, http://www-interbull.slu.se/eval/appen022.html [consulted: 12 Feb. 2003].
  34. Kim J.J., Farnir F., Coppieters W., Johnson D., Georges M., Evaluation of a new QTL fine-mapping method exploiting linkage disequilibrium on BTA14 and BTA20 in a dairy cattle, in: Proceedings of the 7th World Congress on Genetics Applied to Livestock Production, Montpellier, France, 19-23 August 2002, ISBN 2-7380-1052-0, Paper 21-23.
  35. Klungland H., Sabry A., Heringstad B., Olsen H.G., Gomez-Raya L., Vage D.I., Olsaker I., Odegard J., Klemetsdal G., Schulman N., Vilkki J., Ruane J., Aasland M., Ronningen K., Lien S., Quantitative trait loci affecting clinical mastitis and somatic cell count in dairy cattle, Mamm. Genome 12 (2001) 837-842 [PubMed].
  36. Konfortov B.A., Licence V.E., Miller J.R., Re-sequencing of DNA from a diverse panel of cattle reveals a high level of polymorphism in both intron and exon, Mamm. Genome 10 (1999) 1142-1145 [CrossRef] [PubMed].
  37. Kuhn C., Bennewitz J., Reinsch N., Xu N., Thomsen H., Looft C., Brockmann G.A., Schwerin M., Weimann C., Hiendleder S., Erhardt G., Medjugorac I., Forster M., Brenig B., Reinhardt F., Reents R., Russ I., Averdunk G., Blumel J., Kalm E., Quantitative trait loci mapping of functional traits in the German Holstein cattle population, J. Dairy Sci. 86 (2003) 360-368 [PubMed].
  38. Kuhn C., Freyer G., Weikard R., Goldammer T., Schwerin M., Detection of QTL for milk production traits in cattle by application of a specifically developed marker map of BTA6, Anim. Genet. 30 (1999) 333-340 [CrossRef] [PubMed].
  39. Larroque H., Gallard Y., Thaunat L., Boichard D., Colleau J.J., A crossbreeding experiment to detect quantitative trait loci in dairy cattle, in: Proceedings of the 7th World Congress on Genetics Applied to Livestock Production, Montpellier, France, 19-23 August 2002, ISBN 2-7380-1052-0, Paper 01-42.
  40. Lien S., Gomez Raya L., Steine T., Fimland E., Rogne S., Associations between casein haplotypes and milk yield traits, J. Dairy Sci. 78 (1995) 2047-2056 [PubMed].
  41. Lipkin E., Mosig M.O., Darvasi A., Ezra E., Shalom A., Friedmann A., Soller M., Quantitative trait locus mapping in dairy cattle by means of selective milk DNA pooling using dinucleotide microsatellite markers: Analysis of milk protein percentage, Genetics 149 (1998) 1557-1567 [PubMed].
  42. Liu H.C., Cheng H.H., Integrating molecular approaches with QTL to identify positional candidate genes, in: Proceedings of the 7th World Congress on Genetics Applied to Livestock Production, Montpellier, France, 19-23 August 2002, ISBN 2-7380-1052-0, Paper 21-22.
  43. Looft C., Reinsch N., Karall-Albrecht C., Paul S., Brink M., Thomsen H., Brockmann G., Kuhn C., Schwerin M., Kalm E., A mammary gland EST showing linkage disequilibrium to a milk production QTL on bovine Chromosome 14, Mamm. Genome 12 (2001) 646-650 [CrossRef] [PubMed].
  44. Mackay T.F.C., Quantitative trait loci in Drosophila, Nat. Rev. Genet. 2 (2001) 11-20 [CrossRef] [PubMed].
  45. Mackinnon M.J., Georges M.A.J., Marker-assisted preselection of young dairy sires prior to progeny-testing, Livest. Prod. Sci. 54 (1998) 229-250 [CrossRef].
  46. Maki-Tanila A., De Koning D.J., Elo K.T., Moisio S., Velmala R., Vilkki H.J., Mapping multiple quantitative trait loci by regression in half sib designs, in: Proceedings of the 6th World Congress on Genetics Applied to Livestock Production, Armidale, Vol. 26, 1998, 6 WCGALP Congress Office, University of New-England, Armidale, pp. 269-272.
  47. Mosig M.O., Lipkin E., Khutoreskaya G., Tchourzyna E., Soller M., Friedmann A., A whole genome scan for quantitative trait loci affecting milk protein percentage in Israeli-Holstein cattle, by means of selective milk DNA pooling in a daughter design, using an adjusted false discovery rate criterion, Genetics 157 (2001) 1683-1698 [PubMed].
  48. Nadesalingam J., Plante Y., Gibson J.P., Detection of QTL for milk production on Chromosomes 1 and 6 of Holstein cattle, Mamm. Genome 12 (2001) 27-31 [CrossRef] [PubMed].
  49. Olsen H.G., Gomez-Raya L., Vage D.I., Olsaker I., Klungland H., Svendsen M., Adnøy T., Sabry A., Klemetsda G., Schulman N., Kramer W., Thaller G., Rønningen K., Lien S., A genome scan for quantitative trait loci affecting milk production in Norwegian dairy cattle, J. Dairy Sci. 85 (2002) 3124-3130 [PubMed].
  50. Plante Y., Gibson J.P., Nadesalingam J., Mehrabani-Yeganeh H., Lefebvre S., Vandervoort G., Jansen G.B., Detection of quantitative trait loci affecting milk production traits on 10 chromosomes in Holstein cattle, J. Dairy Sci. 84 (2001) 1516-1524 [PubMed].
  51. Reinsch N., Thomsen H., Looft C., Kalm E., Grupe S., Kuhn C., Schwerin M., Leyhe-Horn B., Hiendleder S., Erhardt G., Medjugorac I., Russ I., Forster M., Brenig B., Reents R., Averdunk G., First results on somatic cell count loci from the ADR bovine mapping project, in: Proceedings of the 6th World Congress on Genetics Applied to Livestock Production, Armidale, Vol. 26, 1998, 6 WCGALP Congress Office, University of New-England, Armidale, pp. 426-428.
  52. Riquet J., Coppieters W., Cambisano N., Arranz J.J., Berzi P., Davis S.K., Grisart B., Farnir F., Karim L., Mni M., Simon P., Taylor J.F., Vanmanshoven P., Wagenaar D., Womack J.E., Georges M., Fine-mapping of quantitative trait loci by identity by descent in outbred populations: application to milk production in dairy cattle, Proc. Natl. Acad. Sci. USA 96 (1999) 9252-9257 [CrossRef] [PubMed].
  53. Rodriguez-Zas S.L., Southey B.R., Heyen D.W., Lewin H.A., Interval and composite interval mapping of somatic cell score, yield, and components of milk in dairy cattle, J. Dairy Sci. 85 (2002) 3081-3091 [PubMed].
  54. Ron M., Kliger D., Feldmesser E., Seroussi E., Ezra E., Weller J.I., Multiple quantitative trait locus analysis of bovine chromosome 6 in the Israeli Holstein population by a daughter design, Genetics 159 (2001) 727-735 [PubMed].
  55. Ron M., Heyen D.W., Weller J.I., Band M., Feldmesser E., Pasternak H., Da Y., Wiggans G.R., VanRaden P.M., Ezra E., Lewin H.A., Detection and analysis of a locus affecting milk concentration in the US and Israeli dairy cattle populations, in: Proceedings of the 6th World Congress on Genetics Applied to Livestock Production, Armidale, Vol. 26, 1998, 6 WCGALP Congress Office, University of New-England, Armidale, pp. 422-425.
  56. Schrooten C., Bovenhuis H., Coppieters W., van Arendonk J.A.M., Whole genome scan to detect quantitative trait loci for conformation and functional traits in dairy cattle, J. Dairy Sci. 83 (2000) 795-806 [PubMed].
  57. Schulman N.F., Moisio S.M., De Koning D.J., Elo K., Mäki-Tanila A., Vilkki J., QTL for health traits in Finnish Ayrshire cattle, in: Proceedings of the 7th World Congress on Genetics Applied to Livestock Production, Montpellier, France, 19-23 August 2002, ISBN 2-7380-1052-0, Paper 09-19.
  58. Sonstegard T.S., Van Tassell C.P., Ashwell M.S., Dairy cattle genomics: Tools to accelerate genetic improvement?, J. Anim. Sci. 79 (2001) E307-E315.
  59. Spelman R., Garrick D., Utilisation of marker assisted selection in a commercial dairy cow population, Livest. Prod. Sci. 47 (1997) 139-147 [CrossRef].
  60. Spelman R.J., Coppieters W., Karim L., van Arendonk J.A.M., Bovenhuis H., Quantitative trait loci analysis for five milk production traits on chromosome six in the Dutch Holstein-Friesian population, Genetics 144 (1996) 1799-1808 [PubMed].
  61. Spelman R.J., Coppieters W., Grisart B., Blott S., Georges M., Review of QTL mapping in the New Zealand and Dutch dairy cattle populations, Proc. Assoc. Advmt. Anim. Breed. Genet. 14 (2000) 11-16.
  62. Velmala R., Vilkki J., Elo K., Maki-Tanila A., Casein haplotypes and their association with milk production traits in the Finnish Ayrshire cattle, Anim. Genet. 26 (1995) 419-425 [PubMed].
  63. Velmala R.J., Vilkki H.J., Elo K.T., De Koning D.J., Maki-Tanila A.V., A search for quantitative trait loci for milk production traits on chromosome 6 in Finnish Ayrshire cattle, Anim. Genet. 30 (1999) 136-143 [CrossRef] [PubMed].
  64. Vignal A., Milan D., Sancristobal M., Eggen A., A review on SNP and other types of molecular markers and their use in animal genetics, Genet. Sel. Evol. 34 (2002) 275-305 [EDP Sciences] [CrossRef] [PubMed].
  65. Vilkki H.J., De Koning D.J., Elo K.T., Velmala R., Maki-Tanila A., Multiple marker mapping of quantitative trait loci of Finnish dairy cattle by regression, J. Dairy Sci. 80 (1997) 198-204 [PubMed].
  66. Viitala S.M., Schulman N.F., de Koning D.J., Elo K., Kinos R., Virta A., Virta J., Maki-Tanila A., Vilkki J.H., Quantitative trait loci affecting milk production traits in Finnish Ayrshire dairy cattle, J. Dairy Sci. 86 (2003) 1828-1836 [PubMed].
  67. Weller J.I., Kashi Y., Soller M., Power of daughter and granddaughter designs for determining linkage between marker loci and quantitative trait loci in dairy cattle, J. Dairy Sci. 73 (1990) 2525-2537 [PubMed].
  68. Wiener P., Maclean I., Williams J.L., Woolliams J.A., Testing for the presence of previously identified QTL for milk production traits in new populations, Anim. Genet. 31 (2000) 385-395 [CrossRef] [PubMed].
  69. Williams J., Wooliams J., Bovine genome analysis, Annual Report 97-98, Roslin Institute, UK, 1998, pp. 43-46.
  70. Winter A., Kramer W., Werner F.A.O., Kollers S., Kata S., Durstewitz G., Buitkamp J., Womack J.E., Thaller G., Fries R., Association of a lysine-232/alanine polymorphism in a bovine gene encoding acyl-CoA:diacylglycerol acyltransferase (DGAT1) with variation at a quantitative trait locus for milk fat content, Proc. Natl. Acad. Sci. USA 99 (2002) 9300-9305 [CrossRef] [PubMed].
  71. Zhang Q., Boichard D., Hoeschele I., Ernst C., Eggen A., Murkve B., Pfistergenskow M., Witte L.A., Grignola F.E., Uimari P., Thaller G., Bishop M.D., Mapping quantitative trait loci for milk production and health of dairy cattle in a large outbred pedigree, Genetics 149 (1998) 1959-1973 [PubMed].