Association studies using random and “candidate” microsatellite loci in two infectious goat diseases

Gabriela Obexer-Ruff; Ursula Sattler; Dominique Martinez; Jean-Charles Maillard; Christophe Chartier; Nasikat Saitbekova; Marie-Louise Glowatzki; Claude Gaillard

doi:doi:10.1051/gse:2003020

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Volume 35 / No Suppl. 1 (2003)

Genet. Sel. Evol., 35 Suppl. 1 (2003) S113-S119

Abstract

Free Access

Issue		Genet. Sel. Evol. Volume 35, Number Suppl. 1, 2003 Second International Symposium on Candidate Genes for Animal Health


Page(s)		S113 - S119
DOI		https://doi.org/10.1051/gse:2003020

Genet. Sel. Evol. 35 (2003) S113-S119
DOI: 10.1051/gse:2003020

Association studies using random and "candidate" microsatellite loci in two infectious goat diseases

Gabriela Obexer-Ruff^a, Ursula Sattler^a, Dominique Martinez^b, Jean-Charles Maillard^b, Christophe Chartier^c, Nasikat Saitbekova^a, Marie-Louise Glowatzki^a and Claude Gaillard^a

^a University of Berne, Institute of Animal Genetics, Nutrition and Housing, Berne, Switzerland
^b Cirad-EMVT, Petit-Bourg, Guadeloupe, FWI, Montpellier, France
^c Affsa, Laboratoire d'études et de recherches caprines, Niort, France

(Accepted 4 February 2003)

Abstract
We established a set of 30 microsatellites of Bovidae origin for use in a biodiversity study in Swiss and Creole goats. Additional microsatellites located within or next to "candidate" genes of interest, such as cytokine genes (IL4, INF-gamma) and MHC class II genes (DRB, DYA) were tested in the caprine species in order to detect possible associations with two infectious caprine diseases. Microsatellite analysis was undertaken using automated sequencers (ABI373 & 3100). In the first study, a total of 82 unrelated Creole goats, 37 resistant and 45 susceptible to Heartwater disease (Cowdriosis) were analysed. In this study, the two microsatellite loci DRBP1 (MHCII) and BOBT24 (IL4) were positively associated with disease susceptibility, demonstrating a corrected P-value of 0.002 and 0.005, respectively. In a second investigation, we tested 36 goats, naturally infected with the nematode parasite Trichostrongylus colubriformis. These animals were divided into a "low" and "high" excreting group on the basis of two independently recorded fecal egg counts. For this nematode resistance study, we detected a significant association of one of the alleles of the microsatellite locus SPS113 with "low" excretion (resistance). The MHC class II locus DYA (P19), was weakly associated with susceptibility in both diseases ( $P_{\rm c} = 0.05$ ). In future experiments, we will extend the sample size in order to verify the described associations.

Key words: disease association / microsatellites / goats

Correspondence and reprints: Gabriela Obexer-Ruff
e-mail: gabriela.obexer-ruff@itz.unibe.ch

© INRA, EDP Sciences 2003